Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.6■□□□□ 0.41
HIPK3Q9H422 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIPK3Q9H422 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.6■□□□□ 0.41
HIPK3Q9H422 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIPK3Q9H422 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIPK3Q9H422 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIPK3Q9H422 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HIPK3Q9H422 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIPK3Q9H422 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.6■□□□□ 0.41
HIPK3Q9H422 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.6■□□□□ 0.41
HIPK3Q9H422 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.6■□□□□ 0.41
HIPK3Q9H422 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIPK3Q9H422 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.6■□□□□ 0.41
HIPK3Q9H422 AL359711.2-201ENST00000563105 872 ntBASIC17.6■□□□□ 0.41
HIPK3Q9H422 AC244093.1-201ENST00000610837 814 ntBASIC17.6■□□□□ 0.41
HIPK3Q9H422 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIPK3Q9H422 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.6■□□□□ 0.41
HIPK3Q9H422 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.6■□□□□ 0.41
HIPK3Q9H422 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIPK3Q9H422 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIPK3Q9H422 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIPK3Q9H422 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HIPK3Q9H422 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.6■□□□□ 0.41
HIPK3Q9H422 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HIPK3Q9H422 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
HIPK3Q9H422 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 AC006538.1-201ENST00000567905 1585 ntBASIC17.59■□□□□ 0.41
HIPK3Q9H422 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 AC005229.1-201ENST00000392885 409 ntBASIC17.59■□□□□ 0.41
HIPK3Q9H422 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 RPL13P2-201ENST00000440687 659 ntBASIC17.59■□□□□ 0.41
HIPK3Q9H422 RPL7P3-201ENST00000441388 714 ntBASIC17.59■□□□□ 0.41
HIPK3Q9H422 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 PTP4A1P2-201ENST00000546033 454 ntBASIC17.59■□□□□ 0.41
HIPK3Q9H422 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HIPK3Q9H422 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HIPK3Q9H422 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIPK3Q9H422 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.58■□□□□ 0.41
HIPK3Q9H422 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HIPK3Q9H422 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.58■□□□□ 0.41
HIPK3Q9H422 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HIPK3Q9H422 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.58■□□□□ 0.41
HIPK3Q9H422 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIPK3Q9H422 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.58■□□□□ 0.41
HIPK3Q9H422 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.58■□□□□ 0.41
HIPK3Q9H422 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.58■□□□□ 0.41
HIPK3Q9H422 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIPK3Q9H422 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIPK3Q9H422 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HIPK3Q9H422 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIPK3Q9H422 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK3Q9H422 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK3Q9H422 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK3Q9H422 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK3Q9H422 FAM86LP-201ENST00000478302 853 ntBASIC17.58■□□□□ 0.4
HIPK3Q9H422 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 AC103810.3-201ENST00000583567 96 ntBASIC17.58■□□□□ 0.4
HIPK3Q9H422 BRI3BPP1-201ENST00000594224 787 ntBASIC17.58■□□□□ 0.4
HIPK3Q9H422 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK3Q9H422 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK3Q9H422 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK3Q9H422 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK3Q9H422 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms