Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 AC099063.4-201ENST00000641099 1602 ntBASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 MCCD1P2-201ENST00000423228 335 ntBASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 AC005829.1-201ENST00000570002 483 ntBASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 AL513190.1-201ENST00000621254 727 ntBASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXP3Q9BZS1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 AC008677.1-201ENST00000519230 1561 ntBASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 IGHV3-65-201ENST00000523210 341 ntBASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 MIR4469-201ENST00000583919 79 ntBASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 AC008667.4-201ENST00000607370 168 ntBASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 TSPY26P-202ENST00000565928 3884 ntBASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 HYMAI-201ENST00000635591 3347 ntBASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXP3Q9BZS1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms