Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 AL121912.1-201ENST00000603683 238 ntBASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 AL365330.1-201ENST00000607459 531 ntBASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC117500.6-201ENST00000624871 588 ntBASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC013268.4-201ENST00000637413 2228 ntBASIC12.52□□□□□ -0.41
SHANK2-AS3Q9BTD1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 KRT18P34-201ENST00000488218 1270 ntBASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC108751.1-201ENST00000490852 363 ntBASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SHANK2-AS3Q9BTD1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 PPT1-215ENST00000641471 2368 ntBASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms