Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CMKLR1Q99788 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CMKLR1Q99788 ARSEP1-201ENST00000420443 635 ntBASIC15.5■□□□□ 0.07
CMKLR1Q99788 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 INE1-201ENST00000456273 945 ntBASIC15.5■□□□□ 0.07
CMKLR1Q99788 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CMKLR1Q99788 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CMKLR1Q99788 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CMKLR1Q99788 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 AC008494.3-201ENST00000606615 944 ntBASIC15.5■□□□□ 0.07
CMKLR1Q99788 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CMKLR1Q99788 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CMKLR1Q99788 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CMKLR1Q99788 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CMKLR1Q99788 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CMKLR1Q99788 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CMKLR1Q99788 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CMKLR1Q99788 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 SLC7A15P-201ENST00000424028 1363 ntBASIC15.49■□□□□ 0.07
CMKLR1Q99788 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 NKILA-202ENST00000614771 2598 ntBASIC15.49■□□□□ 0.07
CMKLR1Q99788 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 U91328.1-201ENST00000437528 223 ntBASIC15.49■□□□□ 0.07
CMKLR1Q99788 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 IGHV3-71-201ENST00000523324 359 ntBASIC15.49■□□□□ 0.07
CMKLR1Q99788 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 TPRX2P-201ENST00000535362 881 ntBASIC15.49■□□□□ 0.07
CMKLR1Q99788 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 SRD5A3P1-201ENST00000603021 949 ntBASIC15.49■□□□□ 0.07
CMKLR1Q99788 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 AC007431.3-201ENST00000623221 587 ntBASIC15.49■□□□□ 0.07
CMKLR1Q99788 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CMKLR1Q99788 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CMKLR1Q99788 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CMKLR1Q99788 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CMKLR1Q99788 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CMKLR1Q99788 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CMKLR1Q99788 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CMKLR1Q99788 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CMKLR1Q99788 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CMKLR1Q99788 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CMKLR1Q99788 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CMKLR1Q99788 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms