Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.39■□□□□ 0.05
COL21A1Q96P44 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 FLJ16779-201ENST00000612722 7638 ntBASIC15.39■□□□□ 0.05
COL21A1Q96P44 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 RNU1-129P-201ENST00000384064 167 ntBASIC15.39■□□□□ 0.05
COL21A1Q96P44 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 PMS2P4-201ENST00000412466 1052 ntBASIC15.39■□□□□ 0.05
COL21A1Q96P44 AC140658.5-201ENST00000438532 169 ntBASIC15.39■□□□□ 0.05
COL21A1Q96P44 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 MIR3909-201ENST00000579518 119 ntBASIC15.39■□□□□ 0.05
COL21A1Q96P44 U1.21-201ENST00000580816 167 ntBASIC15.39■□□□□ 0.05
COL21A1Q96P44 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 AL031055.1-201ENST00000606362 631 ntBASIC15.39■□□□□ 0.05
COL21A1Q96P44 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL21A1Q96P44 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.39■□□□□ 0.05
COL21A1Q96P44 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 MCCD1P2-201ENST00000423228 335 ntBASIC15.38■□□□□ 0.05
COL21A1Q96P44 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 MTDHP5-201ENST00000598980 586 ntBASIC15.38■□□□□ 0.05
COL21A1Q96P44 AC020765.3-201ENST00000613051 740 ntBASIC15.38■□□□□ 0.05
COL21A1Q96P44 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 AC010491.1-201ENST00000563101 2797 ntBASIC15.38■□□□□ 0.05
COL21A1Q96P44 AL603832.2-201ENST00000566195 2125 ntBASIC15.38■□□□□ 0.05
COL21A1Q96P44 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
COL21A1Q96P44 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL21A1Q96P44 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms