Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 HLA-H-201ENST00000383620 1096 ntBASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 AC004987.2-201ENST00000395959 1148 ntBASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 IGHV3-62-201ENST00000520057 340 ntBASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 AC005829.1-201ENST00000570002 483 ntBASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 PAUPAR-201ENST00000630360 2965 ntBASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PDLIM5Q96HC4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 CROCCP1-201ENST00000426910 5675 ntBASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 RPS8P6-201ENST00000426177 609 ntBASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 DNAJB3-201ENST00000446806 729 ntBASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 AC134407.2-201ENST00000625089 1978 ntBASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PDLIM5Q96HC4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 AC132872.4-202ENST00000622924 2756 ntBASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 AL592309.1-201ENST00000443127 649 ntBASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 TIMM8BP1-201ENST00000452384 211 ntBASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 YBX1P5-201ENST00000509441 847 ntBASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 RNA5SP410-201ENST00000516285 106 ntBASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDLIM5Q96HC4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms