Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.42■□□□□ 0.38
SEMA4DQ92854 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA4DQ92854 AL691403.2-201ENST00000618460 490 ntBASIC17.42■□□□□ 0.38
SEMA4DQ92854 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SEMA4DQ92854 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA4DQ92854 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA4DQ92854 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA4DQ92854 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA4DQ92854 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.42■□□□□ 0.38
SEMA4DQ92854 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.42■□□□□ 0.38
SEMA4DQ92854 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA4DQ92854 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SEMA4DQ92854 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 CROCCP1-201ENST00000426910 5675 ntBASIC17.41■□□□□ 0.38
SEMA4DQ92854 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 AL139400.1-201ENST00000366220 510 ntBASIC17.41■□□□□ 0.38
SEMA4DQ92854 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA4DQ92854 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SEMA4DQ92854 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SEMA4DQ92854 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.4■□□□□ 0.38
SEMA4DQ92854 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.4■□□□□ 0.38
SEMA4DQ92854 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 AL691432.1-201ENST00000596308 1422 ntBASIC17.4■□□□□ 0.38
SEMA4DQ92854 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.4■□□□□ 0.38
SEMA4DQ92854 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.4■□□□□ 0.38
SEMA4DQ92854 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 CICP6-201ENST00000457191 2729 ntBASIC17.4■□□□□ 0.38
SEMA4DQ92854 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SEMA4DQ92854 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.4■□□□□ 0.38
SEMA4DQ92854 BANF1P1-201ENST00000553684 263 ntBASIC17.4■□□□□ 0.38
SEMA4DQ92854 SNHG9-202ENST00000564014 471 ntBASIC17.4■□□□□ 0.38
SEMA4DQ92854 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.4■□□□□ 0.38
SEMA4DQ92854 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 AC139530.3-201ENST00000620344 690 ntBASIC17.4■□□□□ 0.38
SEMA4DQ92854 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.4■□□□□ 0.38
SEMA4DQ92854 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SEMA4DQ92854 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SEMA4DQ92854 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SEMA4DQ92854 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SEMA4DQ92854 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA4DQ92854 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
SEMA4DQ92854 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
SEMA4DQ92854 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms