Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CT55Q8WUE5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CT55Q8WUE5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CT55Q8WUE5 AC009053.2-201ENST00000563701 2365 ntBASIC15.02□□□□□ -0.01
CT55Q8WUE5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CT55Q8WUE5 AC012313.1-201ENST00000593393 3059 ntBASIC15.01□□□□□ -0.01
CT55Q8WUE5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CT55Q8WUE5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.01□□□□□ -0.01
CT55Q8WUE5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 CDC14C-201ENST00000428251 1719 ntBASIC15.01□□□□□ -0.01
CT55Q8WUE5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.01□□□□□ -0.01
CT55Q8WUE5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 EEF1DP4-201ENST00000446006 880 ntBASIC15.01□□□□□ -0.01
CT55Q8WUE5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.01□□□□□ -0.01
CT55Q8WUE5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CT55Q8WUE5 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.01□□□□□ -0.01
CT55Q8WUE5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 MIR6805-201ENST00000615055 62 ntBASIC15.01□□□□□ -0.01
CT55Q8WUE5 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CT55Q8WUE5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CT55Q8WUE5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
CT55Q8WUE5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CT55Q8WUE5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15□□□□□ -0.01
CT55Q8WUE5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CT55Q8WUE5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15□□□□□ -0.01
CT55Q8WUE5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CT55Q8WUE5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15□□□□□ -0.01
CT55Q8WUE5 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15□□□□□ -0.01
CT55Q8WUE5 MIR658-201ENST00000385210 100 ntBASIC15□□□□□ -0.01
CT55Q8WUE5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15□□□□□ -0.01
CT55Q8WUE5 AC007389.4-201ENST00000454674 793 ntBASIC15□□□□□ -0.01
CT55Q8WUE5 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15□□□□□ -0.01
CT55Q8WUE5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15□□□□□ -0.01
CT55Q8WUE5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15□□□□□ -0.01
CT55Q8WUE5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15□□□□□ -0.01
CT55Q8WUE5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15□□□□□ -0.01
CT55Q8WUE5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15□□□□□ -0.01
CT55Q8WUE5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15□□□□□ -0.01
CT55Q8WUE5 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15□□□□□ -0.01
CT55Q8WUE5 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15□□□□□ -0.01
CT55Q8WUE5 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
CT55Q8WUE5 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CT55Q8WUE5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15□□□□□ -0.01
CT55Q8WUE5 AL033527.5-201ENST00000641382 801 ntBASIC15□□□□□ -0.01
CT55Q8WUE5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
CT55Q8WUE5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15□□□□□ -0.01
CT55Q8WUE5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15□□□□□ -0.01
CT55Q8WUE5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15□□□□□ -0.01
CT55Q8WUE5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CT55Q8WUE5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CT55Q8WUE5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CT55Q8WUE5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CT55Q8WUE5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CT55Q8WUE5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CT55Q8WUE5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CT55Q8WUE5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.99□□□□□ -0.01
CT55Q8WUE5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CT55Q8WUE5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CT55Q8WUE5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CT55Q8WUE5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CT55Q8WUE5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CT55Q8WUE5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms