Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM35BQ8NCS4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM35BQ8NCS4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TMEM35BQ8NCS4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TMEM35BQ8NCS4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM35BQ8NCS4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM35BQ8NCS4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 AC008677.1-201ENST00000519230 1561 ntBASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 FAM220BP-201ENST00000377689 816 ntBASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 UPF3AP3-201ENST00000420996 769 ntBASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 AC112482.1-201ENST00000492080 688 ntBASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 AC010327.4-202ENST00000591484 748 ntBASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 AC084121.4-201ENST00000641598 221 ntBASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 AF228730.8-201ENST00000642140 221 ntBASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 UXT-AS1-201ENST00000590504 1525 ntBASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM35BQ8NCS4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 RPSAP43-201ENST00000402237 625 ntBASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 AC069335.1-201ENST00000489972 472 ntBASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 AC061975.2-201ENST00000581722 295 ntBASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 AC022145.2-201ENST00000598203 171 ntBASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM35BQ8NCS4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 HLA-H-201ENST00000383620 1096 ntBASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM35BQ8NCS4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms