Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRTM2Q8N967 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRTM2Q8N967 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.28□□□□□ -0.28
LRTM2Q8N967 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.28□□□□□ -0.28
LRTM2Q8N967 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
LRTM2Q8N967 C18orf15-201ENST00000623680 2534 ntBASIC13.28□□□□□ -0.28
LRTM2Q8N967 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRTM2Q8N967 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRTM2Q8N967 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
LRTM2Q8N967 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
LRTM2Q8N967 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
LRTM2Q8N967 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRTM2Q8N967 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
LRTM2Q8N967 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
LRTM2Q8N967 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRTM2Q8N967 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRTM2Q8N967 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRTM2Q8N967 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRTM2Q8N967 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.27□□□□□ -0.28
LRTM2Q8N967 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.28
LRTM2Q8N967 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.27□□□□□ -0.28
LRTM2Q8N967 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRTM2Q8N967 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRTM2Q8N967 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.27□□□□□ -0.29
LRTM2Q8N967 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.27□□□□□ -0.29
LRTM2Q8N967 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.27□□□□□ -0.29
LRTM2Q8N967 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
LRTM2Q8N967 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.27□□□□□ -0.29
LRTM2Q8N967 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 RBM17P3-201ENST00000417687 1192 ntBASIC13.27□□□□□ -0.29
LRTM2Q8N967 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.27□□□□□ -0.29
LRTM2Q8N967 DUX4L26-201ENST00000489078 1255 ntBASIC13.27□□□□□ -0.29
LRTM2Q8N967 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.27□□□□□ -0.29
LRTM2Q8N967 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.27□□□□□ -0.29
LRTM2Q8N967 AL365330.1-201ENST00000607459 531 ntBASIC13.27□□□□□ -0.29
LRTM2Q8N967 AC021097.1-201ENST00000607902 574 ntBASIC13.27□□□□□ -0.29
LRTM2Q8N967 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LRTM2Q8N967 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LRTM2Q8N967 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.27□□□□□ -0.29
LRTM2Q8N967 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.27□□□□□ -0.29
LRTM2Q8N967 AC026748.1-201ENST00000624349 3251 ntBASIC13.27□□□□□ -0.29
LRTM2Q8N967 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LRTM2Q8N967 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.27□□□□□ -0.29
LRTM2Q8N967 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRTM2Q8N967 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 KRT16P4-201ENST00000453883 522 ntBASIC13.26□□□□□ -0.29
LRTM2Q8N967 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRTM2Q8N967 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.26□□□□□ -0.29
LRTM2Q8N967 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 AP001282.1-201ENST00000531301 1499 ntBASIC13.26□□□□□ -0.29
LRTM2Q8N967 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.26□□□□□ -0.29
LRTM2Q8N967 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms