Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AC120045.2-201ENST00000567334 178 ntBASIC13.41□□□□□ -0.26
CSMD2Q7Z408 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
CSMD2Q7Z408 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CSMD2Q7Z408 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CSMD2Q7Z408 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 CYP46A4P-201ENST00000414953 267 ntBASIC13.4□□□□□ -0.26
CSMD2Q7Z408 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 AC141586.1-203ENST00000567242 366 ntBASIC13.4□□□□□ -0.26
CSMD2Q7Z408 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 CU633904.3-201ENST00000624042 1029 ntBASIC13.4□□□□□ -0.26
CSMD2Q7Z408 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 AC134915.1-201ENST00000426461 574 ntBASIC13.4□□□□□ -0.26
CSMD2Q7Z408 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 AP001063.1-201ENST00000568332 529 ntBASIC13.4□□□□□ -0.26
CSMD2Q7Z408 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSMD2Q7Z408 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CSMD2Q7Z408 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
CSMD2Q7Z408 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 AL138709.1-201ENST00000614840 1693 ntBASIC13.39□□□□□ -0.27
CSMD2Q7Z408 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.39□□□□□ -0.27
CSMD2Q7Z408 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 AC023310.1-201ENST00000554836 735 ntBASIC13.39□□□□□ -0.27
CSMD2Q7Z408 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 RN7SL736P-201ENST00000613111 269 ntBASIC13.39□□□□□ -0.27
CSMD2Q7Z408 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.39□□□□□ -0.27
CSMD2Q7Z408 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms