Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 SNX33P1-201ENST00000592116 1762 ntBASIC12.97□□□□□ -0.33
FAM78BQ5VT40 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 LINC02447-202ENST00000501888 2146 ntBASIC12.97□□□□□ -0.33
FAM78BQ5VT40 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 CDC14C-201ENST00000428251 1719 ntBASIC12.97□□□□□ -0.33
FAM78BQ5VT40 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 POU5F1P6-201ENST00000466990 990 ntBASIC12.97□□□□□ -0.33
FAM78BQ5VT40 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 AC092329.2-201ENST00000598402 547 ntBASIC12.97□□□□□ -0.33
FAM78BQ5VT40 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 AC092119.3-201ENST00000612618 583 ntBASIC12.97□□□□□ -0.33
FAM78BQ5VT40 C8orf49-201ENST00000525043 1968 ntBASIC12.97□□□□□ -0.33
FAM78BQ5VT40 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 PCGF3-213ENST00000620529 1899 ntBASIC12.97□□□□□ -0.33
FAM78BQ5VT40 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
FAM78BQ5VT40 KRT8P39-201ENST00000396270 1433 ntBASIC12.96□□□□□ -0.33
FAM78BQ5VT40 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 MIR3180-1-201ENST00000580374 94 ntBASIC12.96□□□□□ -0.33
FAM78BQ5VT40 MIR3180-3-201ENST00000584616 94 ntBASIC12.96□□□□□ -0.33
FAM78BQ5VT40 NPAP1P7-201ENST00000613027 823 ntBASIC12.96□□□□□ -0.33
FAM78BQ5VT40 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 AP000867.4-201ENST00000641616 219 ntBASIC12.96□□□□□ -0.33
FAM78BQ5VT40 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 PPT1-215ENST00000641471 2368 ntBASIC12.96□□□□□ -0.33
FAM78BQ5VT40 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.96□□□□□ -0.33
FAM78BQ5VT40 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
FAM78BQ5VT40 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
FAM78BQ5VT40 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.96□□□□□ -0.34
FAM78BQ5VT40 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
FAM78BQ5VT40 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
FAM78BQ5VT40 LINC01144-201ENST00000626198 1710 ntBASIC12.96□□□□□ -0.34
FAM78BQ5VT40 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.96□□□□□ -0.34
FAM78BQ5VT40 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
FAM78BQ5VT40 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms