Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 AC073439.1-201ENST00000624121 1774 ntBASIC15.67■□□□□ 0.1
HMGCS1Q01581 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.67■□□□□ 0.1
HMGCS1Q01581 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HMGCS1Q01581 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 SLC25A1P1-201ENST00000528351 927 ntBASIC15.66■□□□□ 0.1
HMGCS1Q01581 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 AC008677.1-201ENST00000519230 1561 ntBASIC15.66■□□□□ 0.1
HMGCS1Q01581 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCS1Q01581 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCS1Q01581 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms