Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.4■□□□□ 0.22
WNT3AP56704 RNA5SP410-201ENST00000516285 106 ntBASIC16.4■□□□□ 0.22
WNT3AP56704 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.4■□□□□ 0.22
WNT3AP56704 AC024267.1-201ENST00000582320 895 ntBASIC16.4■□□□□ 0.22
WNT3AP56704 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.4■□□□□ 0.22
WNT3AP56704 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.4■□□□□ 0.22
WNT3AP56704 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
WNT3AP56704 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.4■□□□□ 0.22
WNT3AP56704 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.4■□□□□ 0.22
WNT3AP56704 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
WNT3AP56704 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
WNT3AP56704 AC007950.2-201ENST00000615045 2347 ntBASIC16.4■□□□□ 0.22
WNT3AP56704 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
WNT3AP56704 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
WNT3AP56704 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.39■□□□□ 0.22
WNT3AP56704 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
WNT3AP56704 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
WNT3AP56704 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
WNT3AP56704 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.39■□□□□ 0.21
WNT3AP56704 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.39■□□□□ 0.21
WNT3AP56704 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.39■□□□□ 0.21
WNT3AP56704 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
WNT3AP56704 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 HLA-H-201ENST00000383620 1096 ntBASIC16.39■□□□□ 0.21
WNT3AP56704 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.39■□□□□ 0.21
WNT3AP56704 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.39■□□□□ 0.21
WNT3AP56704 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.39■□□□□ 0.21
WNT3AP56704 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
WNT3AP56704 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.39■□□□□ 0.21
WNT3AP56704 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
WNT3AP56704 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.39■□□□□ 0.21
WNT3AP56704 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.39■□□□□ 0.21
WNT3AP56704 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.39■□□□□ 0.21
WNT3AP56704 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
WNT3AP56704 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
WNT3AP56704 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
WNT3AP56704 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.38■□□□□ 0.21
WNT3AP56704 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
WNT3AP56704 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
WNT3AP56704 AC211486.1-202ENST00000416371 468 ntBASIC16.38■□□□□ 0.21
WNT3AP56704 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.38■□□□□ 0.21
WNT3AP56704 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.38■□□□□ 0.21
WNT3AP56704 AC211476.1-201ENST00000503899 468 ntBASIC16.38■□□□□ 0.21
WNT3AP56704 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.38■□□□□ 0.21
WNT3AP56704 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.38■□□□□ 0.21
WNT3AP56704 AC093520.2-201ENST00000561830 333 ntBASIC16.38■□□□□ 0.21
WNT3AP56704 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.38■□□□□ 0.21
WNT3AP56704 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.38■□□□□ 0.21
WNT3AP56704 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.38■□□□□ 0.21
WNT3AP56704 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.38■□□□□ 0.21
WNT3AP56704 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.38■□□□□ 0.21
WNT3AP56704 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.38■□□□□ 0.21
WNT3AP56704 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
WNT3AP56704 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.38■□□□□ 0.21
WNT3AP56704 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
WNT3AP56704 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
WNT3AP56704 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
WNT3AP56704 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
WNT3AP56704 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.37■□□□□ 0.21
WNT3AP56704 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms