Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
LIMK2P53671 U82695.1-201ENST00000635752 1889 ntBASIC16.38■□□□□ 0.21
LIMK2P53671 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.38■□□□□ 0.21
LIMK2P53671 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.38■□□□□ 0.21
LIMK2P53671 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.38■□□□□ 0.21
LIMK2P53671 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.38■□□□□ 0.21
LIMK2P53671 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.38■□□□□ 0.21
LIMK2P53671 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LIMK2P53671 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LIMK2P53671 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.38■□□□□ 0.21
LIMK2P53671 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.38■□□□□ 0.21
LIMK2P53671 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.38■□□□□ 0.21
LIMK2P53671 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.38■□□□□ 0.21
LIMK2P53671 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.38■□□□□ 0.21
LIMK2P53671 AL645728.2-201ENST00000641974 660 ntBASIC16.38■□□□□ 0.21
LIMK2P53671 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LIMK2P53671 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.38■□□□□ 0.21
LIMK2P53671 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.38■□□□□ 0.21
LIMK2P53671 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.38■□□□□ 0.21
LIMK2P53671 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.38■□□□□ 0.21
LIMK2P53671 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LIMK2P53671 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
LIMK2P53671 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
LIMK2P53671 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LIMK2P53671 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LIMK2P53671 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.37■□□□□ 0.21
LIMK2P53671 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.37■□□□□ 0.21
LIMK2P53671 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.37■□□□□ 0.21
LIMK2P53671 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.37■□□□□ 0.21
LIMK2P53671 AC092384.3-202ENST00000564646 2873 ntBASIC16.37■□□□□ 0.21
LIMK2P53671 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LIMK2P53671 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LIMK2P53671 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LIMK2P53671 AC002056.1-201ENST00000395613 760 ntBASIC16.37■□□□□ 0.21
LIMK2P53671 AC004461.1-201ENST00000412461 403 ntBASIC16.37■□□□□ 0.21
LIMK2P53671 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.37■□□□□ 0.21
LIMK2P53671 TSEN15P1-201ENST00000423257 515 ntBASIC16.37■□□□□ 0.21
LIMK2P53671 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LIMK2P53671 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.37■□□□□ 0.21
LIMK2P53671 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.37■□□□□ 0.21
LIMK2P53671 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
LIMK2P53671 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.37■□□□□ 0.21
LIMK2P53671 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.37■□□□□ 0.21
LIMK2P53671 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.37■□□□□ 0.21
LIMK2P53671 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LIMK2P53671 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.37■□□□□ 0.21
LIMK2P53671 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.37■□□□□ 0.21
LIMK2P53671 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LIMK2P53671 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LIMK2P53671 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LIMK2P53671 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LIMK2P53671 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.37■□□□□ 0.21
LIMK2P53671 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.36■□□□□ 0.21
LIMK2P53671 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK2P53671 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LIMK2P53671 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK2P53671 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK2P53671 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.36■□□□□ 0.21
LIMK2P53671 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.36■□□□□ 0.21
LIMK2P53671 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.36■□□□□ 0.21
LIMK2P53671 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK2P53671 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK2P53671 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK2P53671 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK2P53671 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
LIMK2P53671 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK2P53671 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK2P53671 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LIMK2P53671 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.36■□□□□ 0.21
LIMK2P53671 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK2P53671 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
LIMK2P53671 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK2P53671 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK2P53671 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LIMK2P53671 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms