Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.12■□□□□ 0.33
TUBP50607 MIR4453-201ENST00000584019 89 ntBASIC17.12■□□□□ 0.33
TUBP50607 AL096865.1-201ENST00000606796 927 ntBASIC17.12■□□□□ 0.33
TUBP50607 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.12■□□□□ 0.33
TUBP50607 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBP50607 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.12■□□□□ 0.33
TUBP50607 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBP50607 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBP50607 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TUBP50607 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBP50607 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBP50607 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBP50607 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBP50607 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBP50607 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBP50607 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBP50607 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBP50607 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBP50607 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBP50607 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBP50607 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBP50607 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBP50607 AL353705.2-201ENST00000428243 662 ntBASIC17.11■□□□□ 0.33
TUBP50607 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.11■□□□□ 0.33
TUBP50607 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBP50607 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBP50607 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TUBP50607 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBP50607 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
TUBP50607 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBP50607 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBP50607 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
TUBP50607 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TUBP50607 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBP50607 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBP50607 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TUBP50607 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBP50607 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBP50607 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBP50607 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
TUBP50607 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TUBP50607 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBP50607 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBP50607 AC079328.2-201ENST00000561241 3354 ntBASIC17.1■□□□□ 0.33
TUBP50607 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBP50607 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBP50607 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBP50607 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBP50607 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBP50607 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.1■□□□□ 0.33
TUBP50607 BCRP1-201ENST00000444246 691 ntBASIC17.1■□□□□ 0.33
TUBP50607 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.1■□□□□ 0.33
TUBP50607 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBP50607 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBP50607 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBP50607 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.1■□□□□ 0.33
TUBP50607 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBP50607 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBP50607 LINC02228-204ENST00000642115 2962 ntBASIC17.1■□□□□ 0.33
TUBP50607 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBP50607 AL035456.1-201ENST00000456064 1369 ntBASIC17.1■□□□□ 0.33
TUBP50607 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TUBP50607 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TUBP50607 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBP50607 GGT3P-204ENST00000453783 1664 ntBASIC17.1■□□□□ 0.33
TUBP50607 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.1■□□□□ 0.33
TUBP50607 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBP50607 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBP50607 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBP50607 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBP50607 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBP50607 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBP50607 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBP50607 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TUBP50607 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TUBP50607 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 AL662844.4-201ENST00000606367 2838 ntBASIC17.09■□□□□ 0.33
TUBP50607 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TUBP50607 BASP1P1-201ENST00000430708 665 ntBASIC17.09■□□□□ 0.33
TUBP50607 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.09■□□□□ 0.33
TUBP50607 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.09■□□□□ 0.33
TUBP50607 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.09■□□□□ 0.33
TUBP50607 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.09■□□□□ 0.33
TUBP50607 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.09■□□□□ 0.33
TUBP50607 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.09■□□□□ 0.33
TUBP50607 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms