Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.49■□□□□ 0.39
TNFSF9P41273 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF9P41273 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF9P41273 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TNFSF9P41273 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 HAUS4P1-201ENST00000406739 1145 ntBASIC17.49■□□□□ 0.39
TNFSF9P41273 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF9P41273 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF9P41273 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.49■□□□□ 0.39
TNFSF9P41273 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF9P41273 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.49■□□□□ 0.39
TNFSF9P41273 AC011467.4-201ENST00000594891 528 ntBASIC17.49■□□□□ 0.39
TNFSF9P41273 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.49■□□□□ 0.39
TNFSF9P41273 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF9P41273 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
TNFSF9P41273 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 CYP2T1P-202ENST00000641596 2535 ntBASIC17.49■□□□□ 0.39
TNFSF9P41273 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF9P41273 BNIP3P1-202ENST00000550043 1585 ntBASIC17.49■□□□□ 0.39
TNFSF9P41273 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.48■□□□□ 0.39
TNFSF9P41273 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.48■□□□□ 0.39
TNFSF9P41273 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TNFSF9P41273 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.48■□□□□ 0.39
TNFSF9P41273 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFSF9P41273 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.48■□□□□ 0.39
TNFSF9P41273 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TNFSF9P41273 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TNFSF9P41273 SPDYE17-201ENST00000412399 783 ntBASIC17.48■□□□□ 0.39
TNFSF9P41273 MRPS18AP1-201ENST00000414458 589 ntBASIC17.48■□□□□ 0.39
TNFSF9P41273 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.48■□□□□ 0.39
TNFSF9P41273 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.48■□□□□ 0.39
TNFSF9P41273 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFSF9P41273 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TNFSF9P41273 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 AL512361.1-201ENST00000554200 418 ntBASIC17.48■□□□□ 0.39
TNFSF9P41273 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.48■□□□□ 0.39
TNFSF9P41273 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFSF9P41273 AL096865.1-201ENST00000606796 927 ntBASIC17.48■□□□□ 0.39
TNFSF9P41273 AL844908.2-201ENST00000609461 460 ntBASIC17.48■□□□□ 0.39
TNFSF9P41273 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF9P41273 KRT8P12-202ENST00000472924 1397 ntBASIC17.48■□□□□ 0.39
TNFSF9P41273 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TNFSF9P41273 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.48■□□□□ 0.39
TNFSF9P41273 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF9P41273 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TNFSF9P41273 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF9P41273 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF9P41273 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF9P41273 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF9P41273 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF9P41273 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFSF9P41273 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF9P41273 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF9P41273 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TNFSF9P41273 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.47■□□□□ 0.39
TNFSF9P41273 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TNFSF9P41273 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF9P41273 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.47■□□□□ 0.39
TNFSF9P41273 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFSF9P41273 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFSF9P41273 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.47■□□□□ 0.39
TNFSF9P41273 INGX-202ENST00000489074 768 ntBASIC17.47■□□□□ 0.39
TNFSF9P41273 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF9P41273 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF9P41273 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.47■□□□□ 0.39
TNFSF9P41273 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFSF9P41273 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF9P41273 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFSF9P41273 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
TNFSF9P41273 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFSF9P41273 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF9P41273 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms