Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CEACAM3P40198 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.28□□□□□ -0.28
CEACAM3P40198 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.28□□□□□ -0.28
CEACAM3P40198 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CEACAM3P40198 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CEACAM3P40198 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CEACAM3P40198 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CEACAM3P40198 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CEACAM3P40198 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.28□□□□□ -0.28
CEACAM3P40198 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.28□□□□□ -0.28
CEACAM3P40198 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.28□□□□□ -0.28
CEACAM3P40198 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 KRT18P32-201ENST00000424695 1287 ntBASIC13.28□□□□□ -0.28
CEACAM3P40198 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.28□□□□□ -0.28
CEACAM3P40198 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.28□□□□□ -0.28
CEACAM3P40198 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.28□□□□□ -0.28
CEACAM3P40198 AC022145.2-201ENST00000598203 171 ntBASIC13.28□□□□□ -0.28
CEACAM3P40198 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.28□□□□□ -0.28
CEACAM3P40198 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.28□□□□□ -0.28
CEACAM3P40198 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.28□□□□□ -0.28
CEACAM3P40198 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 SPTSSB-204ENST00000617024 1292 ntBASIC13.28□□□□□ -0.28
CEACAM3P40198 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CEACAM3P40198 AC134684.3-201ENST00000641758 218 ntBASIC13.28□□□□□ -0.28
CEACAM3P40198 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CEACAM3P40198 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CEACAM3P40198 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.28□□□□□ -0.28
CEACAM3P40198 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CEACAM3P40198 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.28□□□□□ -0.28
CEACAM3P40198 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.28□□□□□ -0.28
CEACAM3P40198 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CEACAM3P40198 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM3P40198 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CEACAM3P40198 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CEACAM3P40198 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CEACAM3P40198 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CEACAM3P40198 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.27□□□□□ -0.28
CEACAM3P40198 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
CEACAM3P40198 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CEACAM3P40198 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CEACAM3P40198 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.27□□□□□ -0.28
CEACAM3P40198 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CEACAM3P40198 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CEACAM3P40198 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.27□□□□□ -0.28
CEACAM3P40198 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CEACAM3P40198 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CEACAM3P40198 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.27□□□□□ -0.29
CEACAM3P40198 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.27□□□□□ -0.29
CEACAM3P40198 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
CEACAM3P40198 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CEACAM3P40198 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.27□□□□□ -0.29
CEACAM3P40198 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.27□□□□□ -0.29
CEACAM3P40198 AL691403.2-201ENST00000618460 490 ntBASIC13.27□□□□□ -0.29
CEACAM3P40198 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CEACAM3P40198 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.27□□□□□ -0.29
CEACAM3P40198 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CEACAM3P40198 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.27□□□□□ -0.29
CEACAM3P40198 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CEACAM3P40198 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.27□□□□□ -0.29
CEACAM3P40198 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM3P40198 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms