Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20.17■□□□□ 0.82
RFC4P35249 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.17■□□□□ 0.82
RFC4P35249 AC026954.1-201ENST00000429771 1293 ntBASIC20.17■□□□□ 0.82
RFC4P35249 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.17■□□□□ 0.82
RFC4P35249 AC012441.1-201ENST00000446669 685 ntBASIC20.17■□□□□ 0.82
RFC4P35249 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.17■□□□□ 0.82
RFC4P35249 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.17■□□□□ 0.82
RFC4P35249 RN7SL560P-201ENST00000577943 264 ntBASIC20.17■□□□□ 0.82
RFC4P35249 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.17■□□□□ 0.82
RFC4P35249 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RFC4P35249 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC4P35249 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.17■□□□□ 0.82
RFC4P35249 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC4P35249 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RFC4P35249 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RFC4P35249 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RFC4P35249 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC4P35249 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.16■□□□□ 0.82
RFC4P35249 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.16■□□□□ 0.82
RFC4P35249 MSTO2P-201ENST00000314835 1709 ntBASIC20.16■□□□□ 0.82
RFC4P35249 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RFC4P35249 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.16■□□□□ 0.82
RFC4P35249 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RFC4P35249 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.16■□□□□ 0.82
RFC4P35249 VDAC1P7-201ENST00000462417 847 ntBASIC20.16■□□□□ 0.82
RFC4P35249 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 RIT1-205ENST00000539040 919 ntTSL 2 BASIC20.16■□□□□ 0.82
RFC4P35249 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RFC4P35249 AC091271.1-201ENST00000611877 1162 ntBASIC20.16■□□□□ 0.82
RFC4P35249 AC244669.2-201ENST00000612320 853 ntBASIC20.16■□□□□ 0.82
RFC4P35249 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RFC4P35249 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.16■□□□□ 0.82
RFC4P35249 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.16■□□□□ 0.82
RFC4P35249 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC4P35249 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.16■□□□□ 0.82
RFC4P35249 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
RFC4P35249 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 KRT18P64-201ENST00000434946 1219 ntBASIC20.15■□□□□ 0.82
RFC4P35249 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC20.15■□□□□ 0.82
RFC4P35249 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.15■□□□□ 0.82
RFC4P35249 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.15■□□□□ 0.82
RFC4P35249 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC20.15■□□□□ 0.82
RFC4P35249 AP001063.1-201ENST00000568332 529 ntBASIC20.15■□□□□ 0.82
RFC4P35249 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.15■□□□□ 0.82
RFC4P35249 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC20.15■□□□□ 0.82
RFC4P35249 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC20.15■□□□□ 0.82
RFC4P35249 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.15■□□□□ 0.82
RFC4P35249 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.15■□□□□ 0.82
RFC4P35249 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
RFC4P35249 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC4P35249 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RFC4P35249 AC018470.1-201ENST00000624790 3129 ntBASIC20.14■□□□□ 0.82
RFC4P35249 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
RFC4P35249 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFC4P35249 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RFC4P35249 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFC4P35249 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFC4P35249 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.14■□□□□ 0.81
RFC4P35249 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.14■□□□□ 0.81
RFC4P35249 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFC4P35249 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFC4P35249 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFC4P35249 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFC4P35249 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFC4P35249 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.14■□□□□ 0.81
RFC4P35249 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFC4P35249 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC20.14■□□□□ 0.81
RFC4P35249 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.14■□□□□ 0.81
RFC4P35249 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFC4P35249 AC093433.1-201ENST00000458048 571 ntBASIC20.14■□□□□ 0.81
RFC4P35249 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.14■□□□□ 0.81
RFC4P35249 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RFC4P35249 AC106760.1-201ENST00000508690 800 ntBASIC20.14■□□□□ 0.81
RFC4P35249 ZNF767P-206ENST00000513792 565 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms