Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.47■□□□□ 0.23
RPA3P35244 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.47■□□□□ 0.23
RPA3P35244 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RPA3P35244 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.47■□□□□ 0.23
RPA3P35244 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RPA3P35244 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.46■□□□□ 0.23
RPA3P35244 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.46■□□□□ 0.23
RPA3P35244 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RPA3P35244 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.46■□□□□ 0.23
RPA3P35244 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RPA3P35244 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.46■□□□□ 0.23
RPA3P35244 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.46■□□□□ 0.23
RPA3P35244 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.46■□□□□ 0.23
RPA3P35244 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RPA3P35244 PMS2P1-201ENST00000431037 1228 ntBASIC16.46■□□□□ 0.23
RPA3P35244 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.46■□□□□ 0.23
RPA3P35244 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.46■□□□□ 0.23
RPA3P35244 MIR4751-201ENST00000578027 74 ntBASIC16.46■□□□□ 0.23
RPA3P35244 AC091167.2-201ENST00000579581 588 ntBASIC16.46■□□□□ 0.23
RPA3P35244 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.46■□□□□ 0.23
RPA3P35244 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RPA3P35244 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.46■□□□□ 0.23
RPA3P35244 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPA3P35244 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.46■□□□□ 0.22
RPA3P35244 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RPA3P35244 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RPA3P35244 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RPA3P35244 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RPA3P35244 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.45■□□□□ 0.22
RPA3P35244 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.45■□□□□ 0.22
RPA3P35244 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.45■□□□□ 0.22
RPA3P35244 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.45■□□□□ 0.22
RPA3P35244 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RPA3P35244 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.45■□□□□ 0.22
RPA3P35244 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.45■□□□□ 0.22
RPA3P35244 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.45■□□□□ 0.22
RPA3P35244 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RPA3P35244 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.45■□□□□ 0.22
RPA3P35244 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.45■□□□□ 0.22
RPA3P35244 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 AC004790.2-201ENST00000623588 572 ntBASIC16.45■□□□□ 0.22
RPA3P35244 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.45■□□□□ 0.22
RPA3P35244 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.45■□□□□ 0.22
RPA3P35244 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.45■□□□□ 0.22
RPA3P35244 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.45■□□□□ 0.22
RPA3P35244 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RPA3P35244 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.45■□□□□ 0.22
RPA3P35244 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.45■□□□□ 0.22
RPA3P35244 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.45■□□□□ 0.22
RPA3P35244 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPA3P35244 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.45■□□□□ 0.22
RPA3P35244 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPA3P35244 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPA3P35244 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPA3P35244 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPA3P35244 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPA3P35244 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPA3P35244 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
RPA3P35244 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms