Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CHMP24386 AC005829.1-201ENST00000570002 483 ntBASIC15.24■□□□□ 0.03
CHMP24386 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.24■□□□□ 0.03
CHMP24386 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.24■□□□□ 0.03
CHMP24386 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.24■□□□□ 0.03
CHMP24386 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CHMP24386 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CHMP24386 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.24■□□□□ 0.03
CHMP24386 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.23■□□□□ 0.03
CHMP24386 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.23■□□□□ 0.03
CHMP24386 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 AC012569.1-201ENST00000591191 1524 ntBASIC15.23■□□□□ 0.03
CHMP24386 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CHMP24386 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CHMP24386 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.23■□□□□ 0.03
CHMP24386 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.23■□□□□ 0.03
CHMP24386 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.23■□□□□ 0.03
CHMP24386 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.23■□□□□ 0.03
CHMP24386 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 AC068137.2-201ENST00000605408 478 ntBASIC15.23■□□□□ 0.03
CHMP24386 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.23■□□□□ 0.03
CHMP24386 AP001350.2-201ENST00000625104 1094 ntBASIC15.23■□□□□ 0.03
CHMP24386 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.23■□□□□ 0.03
CHMP24386 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CHMP24386 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CHMP24386 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CHMP24386 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.23■□□□□ 0.03
CHMP24386 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP24386 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CHMP24386 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.22■□□□□ 0.03
CHMP24386 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CHMP24386 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP24386 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP24386 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 AP005117.1-202ENST00000581724 1908 ntBASIC15.22■□□□□ 0.03
CHMP24386 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.22■□□□□ 0.03
CHMP24386 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP24386 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
CHMP24386 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.22■□□□□ 0.03
CHMP24386 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.22■□□□□ 0.03
CHMP24386 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.22■□□□□ 0.03
CHMP24386 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.22■□□□□ 0.03
CHMP24386 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP24386 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
CHMP24386 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP24386 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.22■□□□□ 0.03
CHMP24386 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CHMP24386 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
CHMP24386 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.22■□□□□ 0.03
CHMP24386 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP24386 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP24386 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP24386 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP24386 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.21■□□□□ 0.03
CHMP24386 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP24386 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP24386 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHMP24386 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms