Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPA1P20036 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.39■□□□□ 0.22
HLA-DPA1P20036 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.22
HLA-DPA1P20036 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
HLA-DPA1P20036 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 PCDHA1-201ENST00000378133 2726 ntBASIC16.39■□□□□ 0.21
HLA-DPA1P20036 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 FAM220BP-201ENST00000377689 816 ntBASIC16.39■□□□□ 0.21
HLA-DPA1P20036 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 AC069335.1-201ENST00000489972 472 ntBASIC16.39■□□□□ 0.21
HLA-DPA1P20036 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 GPALPP1-207ENST00000611650 899 ntBASIC16.39■□□□□ 0.21
HLA-DPA1P20036 AC006538.3-201ENST00000612495 578 ntBASIC16.39■□□□□ 0.21
HLA-DPA1P20036 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 AL513210.1-201ENST00000629608 234 ntBASIC16.39■□□□□ 0.21
HLA-DPA1P20036 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 AC018695.7-201ENST00000624587 2492 ntBASIC16.39■□□□□ 0.21
HLA-DPA1P20036 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 AL603832.2-201ENST00000566195 2125 ntBASIC16.39■□□□□ 0.21
HLA-DPA1P20036 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DPA1P20036 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 HAUS4P1-201ENST00000406739 1145 ntBASIC16.38■□□□□ 0.21
HLA-DPA1P20036 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 AP000344.2-201ENST00000512987 629 ntBASIC16.38■□□□□ 0.21
HLA-DPA1P20036 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 UXT-AS1-201ENST00000590504 1525 ntBASIC16.38■□□□□ 0.21
HLA-DPA1P20036 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 AC024909.3-201ENST00000611513 2257 ntBASIC16.38■□□□□ 0.21
HLA-DPA1P20036 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DPA1P20036 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms