Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.89■□□□□ 0.93
MS4A1P11836 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MS4A1P11836 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MS4A1P11836 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
MS4A1P11836 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MS4A1P11836 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A1P11836 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.88■□□□□ 0.93
MS4A1P11836 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A1P11836 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A1P11836 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A1P11836 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A1P11836 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A1P11836 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.88■□□□□ 0.93
MS4A1P11836 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A1P11836 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
MS4A1P11836 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A1P11836 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A1P11836 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.88■□□□□ 0.93
MS4A1P11836 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.88■□□□□ 0.93
MS4A1P11836 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.88■□□□□ 0.93
MS4A1P11836 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A1P11836 AC112191.1-201ENST00000523689 701 ntBASIC20.88■□□□□ 0.93
MS4A1P11836 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.88■□□□□ 0.93
MS4A1P11836 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.88■□□□□ 0.93
MS4A1P11836 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.88■□□□□ 0.93
MS4A1P11836 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.88■□□□□ 0.93
MS4A1P11836 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
MS4A1P11836 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.88■□□□□ 0.93
MS4A1P11836 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A1P11836 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A1P11836 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MS4A1P11836 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC20.88■□□□□ 0.93
MS4A1P11836 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.88■□□□□ 0.93
MS4A1P11836 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.87■□□□□ 0.93
MS4A1P11836 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.87■□□□□ 0.93
MS4A1P11836 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC20.87■□□□□ 0.93
MS4A1P11836 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.87■□□□□ 0.93
MS4A1P11836 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
MS4A1P11836 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.87■□□□□ 0.93
MS4A1P11836 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
MS4A1P11836 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
MS4A1P11836 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
MS4A1P11836 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.86■□□□□ 0.93
MS4A1P11836 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MS4A1P11836 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.86■□□□□ 0.93
MS4A1P11836 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC20.86■□□□□ 0.93
MS4A1P11836 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MS4A1P11836 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
MS4A1P11836 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MS4A1P11836 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
MS4A1P11836 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
MS4A1P11836 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
MS4A1P11836 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.86■□□□□ 0.93
MS4A1P11836 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
MS4A1P11836 MED15P5-201ENST00000423150 992 ntBASIC20.86■□□□□ 0.93
MS4A1P11836 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.86■□□□□ 0.93
MS4A1P11836 KRT18P3-201ENST00000451602 1288 ntBASIC20.86■□□□□ 0.93
MS4A1P11836 AC245100.5-201ENST00000452108 331 ntBASIC20.86■□□□□ 0.93
MS4A1P11836 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.86■□□□□ 0.93
MS4A1P11836 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.86■□□□□ 0.93
MS4A1P11836 AP002472.1-201ENST00000577490 586 ntBASIC20.86■□□□□ 0.93
MS4A1P11836 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.86■□□□□ 0.93
MS4A1P11836 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.86■□□□□ 0.93
MS4A1P11836 AL121894.2-201ENST00000602977 491 ntBASIC20.86■□□□□ 0.93
MS4A1P11836 AC120114.3-201ENST00000611923 658 ntBASIC20.86■□□□□ 0.93
MS4A1P11836 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MS4A1P11836 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MS4A1P11836 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC20.86■□□□□ 0.93
MS4A1P11836 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MS4A1P11836 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
MS4A1P11836 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.86■□□□□ 0.93
MS4A1P11836 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
MS4A1P11836 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
MS4A1P11836 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
MS4A1P11836 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
MS4A1P11836 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A1P11836 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
MS4A1P11836 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A1P11836 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A1P11836 AC073439.1-201ENST00000624121 1774 ntBASIC20.85■□□□□ 0.93
MS4A1P11836 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A1P11836 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
MS4A1P11836 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC20.85■□□□□ 0.93
MS4A1P11836 CDC14C-201ENST00000428251 1719 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms