Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
TOP1P11387 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TOP1P11387 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.05■□□□□ 0.64
TOP1P11387 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.05■□□□□ 0.64
TOP1P11387 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.05■□□□□ 0.64
TOP1P11387 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 AC097493.3-201ENST00000509725 367 ntBASIC19.05■□□□□ 0.64
TOP1P11387 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.05■□□□□ 0.64
TOP1P11387 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.05■□□□□ 0.64
TOP1P11387 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.05■□□□□ 0.64
TOP1P11387 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.05■□□□□ 0.64
TOP1P11387 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.05■□□□□ 0.64
TOP1P11387 AC105021.1-202ENST00000570572 669 ntBASIC19.05■□□□□ 0.64
TOP1P11387 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.05■□□□□ 0.64
TOP1P11387 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.05■□□□□ 0.64
TOP1P11387 AL365330.1-201ENST00000607459 531 ntBASIC19.05■□□□□ 0.64
TOP1P11387 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
TOP1P11387 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.05■□□□□ 0.64
TOP1P11387 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.05■□□□□ 0.64
TOP1P11387 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP1P11387 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TOP1P11387 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
TOP1P11387 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.05■□□□□ 0.64
TOP1P11387 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.04■□□□□ 0.64
TOP1P11387 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.04■□□□□ 0.64
TOP1P11387 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TOP1P11387 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TOP1P11387 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.04■□□□□ 0.64
TOP1P11387 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.04■□□□□ 0.64
TOP1P11387 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
TOP1P11387 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.04■□□□□ 0.64
TOP1P11387 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 AC092580.3-201ENST00000430932 139 ntBASIC19.04■□□□□ 0.64
TOP1P11387 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.04■□□□□ 0.64
TOP1P11387 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.04■□□□□ 0.64
TOP1P11387 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.04■□□□□ 0.64
TOP1P11387 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.04■□□□□ 0.64
TOP1P11387 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.04■□□□□ 0.64
TOP1P11387 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.04■□□□□ 0.64
TOP1P11387 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 AC026691.1-201ENST00000602502 2017 ntBASIC19.04■□□□□ 0.64
TOP1P11387 RN7SL828P-201ENST00000607615 303 ntBASIC19.04■□□□□ 0.64
TOP1P11387 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.04■□□□□ 0.64
TOP1P11387 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.04■□□□□ 0.64
TOP1P11387 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP1P11387 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.04■□□□□ 0.64
TOP1P11387 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 AC005052.1-201ENST00000625181 2492 ntBASIC19.03■□□□□ 0.64
TOP1P11387 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.03■□□□□ 0.64
TOP1P11387 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TOP1P11387 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.03■□□□□ 0.64
TOP1P11387 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TOP1P11387 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.03■□□□□ 0.64
TOP1P11387 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TOP1P11387 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.03■□□□□ 0.64
TOP1P11387 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.03■□□□□ 0.64
TOP1P11387 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.03■□□□□ 0.64
TOP1P11387 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP1P11387 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms