Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC025048.6-201ENST00000634326 1161 ntBASIC12.7□□□□□ -0.38
CD28P10747 AL358472.5-202ENST00000641448 1267 ntBASIC12.7□□□□□ -0.38
CD28P10747 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.7□□□□□ -0.38
CD28P10747 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.7□□□□□ -0.38
CD28P10747 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CD28P10747 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CD28P10747 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
CD28P10747 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.7□□□□□ -0.38
CD28P10747 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CD28P10747 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.7□□□□□ -0.38
CD28P10747 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.7□□□□□ -0.38
CD28P10747 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CD28P10747 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.69□□□□□ -0.38
CD28P10747 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CD28P10747 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CD28P10747 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CD28P10747 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CD28P10747 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
CD28P10747 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.69□□□□□ -0.38
CD28P10747 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.69□□□□□ -0.38
CD28P10747 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.69□□□□□ -0.38
CD28P10747 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CD28P10747 AL589702.1-201ENST00000641229 1509 ntBASIC12.69□□□□□ -0.38
CD28P10747 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.69□□□□□ -0.38
CD28P10747 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CD28P10747 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
CD28P10747 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CD28P10747 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.69□□□□□ -0.38
CD28P10747 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 AL080243.2-201ENST00000418783 582 ntBASIC12.69□□□□□ -0.38
CD28P10747 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.69□□□□□ -0.38
CD28P10747 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.69□□□□□ -0.38
CD28P10747 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.69□□□□□ -0.38
CD28P10747 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.69□□□□□ -0.38
CD28P10747 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.69□□□□□ -0.38
CD28P10747 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.69□□□□□ -0.38
CD28P10747 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.69□□□□□ -0.38
CD28P10747 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CD28P10747 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
CD28P10747 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CD28P10747 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.69□□□□□ -0.38
CD28P10747 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD28P10747 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.68□□□□□ -0.38
CD28P10747 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CD28P10747 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.68□□□□□ -0.38
CD28P10747 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.68□□□□□ -0.38
CD28P10747 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CD28P10747 AC007541.1-201ENST00000570282 1469 ntBASIC12.68□□□□□ -0.38
CD28P10747 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.68□□□□□ -0.38
CD28P10747 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.68□□□□□ -0.38
CD28P10747 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.68□□□□□ -0.38
CD28P10747 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CD28P10747 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.68□□□□□ -0.38
CD28P10747 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms