Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 AL009183.1-201ENST00000603760 355 ntBASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 AC007326.2-201ENST00000624224 7579 ntBASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 AL161772.1-201ENST00000610494 4412 ntBASIC13.55□□□□□ -0.24
IGHV3-43DP0DP04 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 AC092919.2-201ENST00000623631 1645 ntBASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 FDX1P1-201ENST00000449115 551 ntBASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 KRT19P2-202ENST00000557173 1012 ntBASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 AL162727.3-201ENST00000635661 2787 ntBASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV3-43DP0DP04 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 AC016027.1-202ENST00000607927 1699 ntBASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 AP002414.2-201ENST00000591780 3365 ntBASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms