Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CYP3A4P08684 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.13■□□□□ 0.49
CYP3A4P08684 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.13■□□□□ 0.49
CYP3A4P08684 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.13■□□□□ 0.49
CYP3A4P08684 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.13■□□□□ 0.49
CYP3A4P08684 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.13■□□□□ 0.49
CYP3A4P08684 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.13■□□□□ 0.49
CYP3A4P08684 MIR3197-201ENST00000582241 73 ntBASIC18.13■□□□□ 0.49
CYP3A4P08684 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.13■□□□□ 0.49
CYP3A4P08684 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.13■□□□□ 0.49
CYP3A4P08684 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.13■□□□□ 0.49
CYP3A4P08684 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.13■□□□□ 0.49
CYP3A4P08684 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.13■□□□□ 0.49
CYP3A4P08684 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.13■□□□□ 0.49
CYP3A4P08684 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.13■□□□□ 0.49
CYP3A4P08684 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.13■□□□□ 0.49
CYP3A4P08684 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CYP3A4P08684 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 Z97205.2-201ENST00000564697 1639 ntBASIC18.12■□□□□ 0.49
CYP3A4P08684 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 CDC14C-201ENST00000428251 1719 ntBASIC18.12■□□□□ 0.49
CYP3A4P08684 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CYP3A4P08684 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CYP3A4P08684 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.12■□□□□ 0.49
CYP3A4P08684 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CYP3A4P08684 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CYP3A4P08684 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CYP3A4P08684 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CYP3A4P08684 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
CYP3A4P08684 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.11■□□□□ 0.49
CYP3A4P08684 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.11■□□□□ 0.49
CYP3A4P08684 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CYP3A4P08684 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CYP3A4P08684 AL603832.2-201ENST00000566195 2125 ntBASIC18.11■□□□□ 0.49
CYP3A4P08684 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.11■□□□□ 0.49
CYP3A4P08684 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CYP3A4P08684 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.11■□□□□ 0.49
CYP3A4P08684 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CYP3A4P08684 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CYP3A4P08684 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CYP3A4P08684 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CYP3A4P08684 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.11■□□□□ 0.49
CYP3A4P08684 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.11■□□□□ 0.49
CYP3A4P08684 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.11■□□□□ 0.49
CYP3A4P08684 AC002472.2-201ENST00000442739 958 ntBASIC18.11■□□□□ 0.49
CYP3A4P08684 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.11■□□□□ 0.49
CYP3A4P08684 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.11■□□□□ 0.49
CYP3A4P08684 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.11■□□□□ 0.49
CYP3A4P08684 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CYP3A4P08684 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CYP3A4P08684 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.11■□□□□ 0.49
CYP3A4P08684 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.11■□□□□ 0.49
CYP3A4P08684 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms