Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.92■□□□□ 0.62
MYCNP04198 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.92■□□□□ 0.62
MYCNP04198 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.92■□□□□ 0.62
MYCNP04198 AC092580.3-201ENST00000430932 139 ntBASIC18.92■□□□□ 0.62
MYCNP04198 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.92■□□□□ 0.62
MYCNP04198 AL606517.1-201ENST00000446914 387 ntBASIC18.92■□□□□ 0.62
MYCNP04198 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.92■□□□□ 0.62
MYCNP04198 OR8X1P-201ENST00000534542 869 ntBASIC18.92■□□□□ 0.62
MYCNP04198 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.92■□□□□ 0.62
MYCNP04198 AC007066.2-202ENST00000566531 914 ntBASIC18.92■□□□□ 0.62
MYCNP04198 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.92■□□□□ 0.62
MYCNP04198 AC003101.2-201ENST00000612557 442 ntBASIC18.92■□□□□ 0.62
MYCNP04198 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
MYCNP04198 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.92■□□□□ 0.62
MYCNP04198 LYSMD4-203ENST00000378904 2122 ntBASIC18.92■□□□□ 0.62
MYCNP04198 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
MYCNP04198 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MYCNP04198 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.92■□□□□ 0.62
MYCNP04198 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.91■□□□□ 0.62
MYCNP04198 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 TTC1-201ENST00000231238 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
MYCNP04198 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MYCNP04198 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.91■□□□□ 0.62
MYCNP04198 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.91■□□□□ 0.62
MYCNP04198 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.91■□□□□ 0.62
MYCNP04198 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC18.91■□□□□ 0.62
MYCNP04198 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.91■□□□□ 0.62
MYCNP04198 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.91■□□□□ 0.62
MYCNP04198 MTND3P12-201ENST00000559068 328 ntBASIC18.91■□□□□ 0.62
MYCNP04198 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.91■□□□□ 0.62
MYCNP04198 AP000842.3-202ENST00000569238 1080 ntBASIC18.91■□□□□ 0.62
MYCNP04198 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.91■□□□□ 0.62
MYCNP04198 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC18.91■□□□□ 0.62
MYCNP04198 AC078899.4-201ENST00000593952 1113 ntBASIC18.91■□□□□ 0.62
MYCNP04198 AC090912.3-201ENST00000609775 533 ntBASIC18.91■□□□□ 0.62
MYCNP04198 AC140725.3-201ENST00000616193 880 ntBASIC18.91■□□□□ 0.62
MYCNP04198 AC026422.1-201ENST00000623961 452 ntBASIC18.91■□□□□ 0.62
MYCNP04198 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC18.91■□□□□ 0.62
MYCNP04198 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.91■□□□□ 0.62
MYCNP04198 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.91■□□□□ 0.62
MYCNP04198 AL358472.5-202ENST00000641448 1267 ntBASIC18.91■□□□□ 0.62
MYCNP04198 SNTG1-202ENST00000518864 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.91■□□□□ 0.62
MYCNP04198 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.91■□□□□ 0.62
MYCNP04198 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.91■□□□□ 0.62
MYCNP04198 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
MYCNP04198 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MYCNP04198 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
MYCNP04198 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
MYCNP04198 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
MYCNP04198 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.9■□□□□ 0.62
MYCNP04198 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
MYCNP04198 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
MYCNP04198 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 UGT1A10-202ENST00000373445 2065 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 RN7SL692P-201ENST00000464677 288 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms