Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.38■□□□□ 0.05
MT-ND1P03886 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.38■□□□□ 0.05
MT-ND1P03886 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.38■□□□□ 0.05
MT-ND1P03886 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MT-ND1P03886 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.38■□□□□ 0.05
MT-ND1P03886 MTDHP3-201ENST00000594186 672 ntBASIC15.38■□□□□ 0.05
MT-ND1P03886 CYP2A7P1-201ENST00000595391 815 ntBASIC15.38■□□□□ 0.05
MT-ND1P03886 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.38■□□□□ 0.05
MT-ND1P03886 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.38■□□□□ 0.05
MT-ND1P03886 REXO1L3P-201ENST00000622202 1288 ntBASIC15.38■□□□□ 0.05
MT-ND1P03886 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.38■□□□□ 0.05
MT-ND1P03886 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
MT-ND1P03886 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.38■□□□□ 0.05
MT-ND1P03886 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
MT-ND1P03886 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.38■□□□□ 0.05
MT-ND1P03886 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.37■□□□□ 0.05
MT-ND1P03886 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-ND1P03886 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.37■□□□□ 0.05
MT-ND1P03886 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.37■□□□□ 0.05
MT-ND1P03886 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-ND1P03886 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-ND1P03886 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 HCG4P8-203ENST00000443049 980 ntBASIC15.37■□□□□ 0.05
MT-ND1P03886 PAWRP1-201ENST00000451083 565 ntBASIC15.37■□□□□ 0.05
MT-ND1P03886 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 AC087163.2-201ENST00000457299 853 ntBASIC15.37■□□□□ 0.05
MT-ND1P03886 KRT18P31-201ENST00000506277 1292 ntBASIC15.37■□□□□ 0.05
MT-ND1P03886 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.37■□□□□ 0.05
MT-ND1P03886 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.37■□□□□ 0.05
MT-ND1P03886 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.37■□□□□ 0.05
MT-ND1P03886 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 AL139424.1-201ENST00000607572 797 ntBASIC15.37■□□□□ 0.05
MT-ND1P03886 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
MT-ND1P03886 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.37■□□□□ 0.05
MT-ND1P03886 AL355877.3-201ENST00000622820 899 ntBASIC15.37■□□□□ 0.05
MT-ND1P03886 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-ND1P03886 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.37■□□□□ 0.05
MT-ND1P03886 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-ND1P03886 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.36■□□□□ 0.05
MT-ND1P03886 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.36■□□□□ 0.05
MT-ND1P03886 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
MT-ND1P03886 AC006486.2-201ENST00000624246 2199 ntBASIC15.36■□□□□ 0.05
MT-ND1P03886 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.36■□□□□ 0.05
MT-ND1P03886 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
MT-ND1P03886 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.36■□□□□ 0.05
MT-ND1P03886 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
MT-ND1P03886 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MT-ND1P03886 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
MT-ND1P03886 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.36■□□□□ 0.05
MT-ND1P03886 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.36■□□□□ 0.05
MT-ND1P03886 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.36■□□□□ 0.05
MT-ND1P03886 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MT-ND1P03886 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MT-ND1P03886 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.36■□□□□ 0.05
MT-ND1P03886 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms