Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CSPG5O95196 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.42■□□□□ 0.38
CSPG5O95196 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CSPG5O95196 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.42■□□□□ 0.38
CSPG5O95196 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.42■□□□□ 0.38
CSPG5O95196 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CSPG5O95196 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG5O95196 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
CSPG5O95196 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.41■□□□□ 0.38
CSPG5O95196 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.41■□□□□ 0.38
CSPG5O95196 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CSPG5O95196 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CSPG5O95196 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CSPG5O95196 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 AC006277.1-201ENST00000624348 1610 ntBASIC17.41■□□□□ 0.38
CSPG5O95196 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CSPG5O95196 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CSPG5O95196 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.41■□□□□ 0.38
CSPG5O95196 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CSPG5O95196 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.41■□□□□ 0.38
CSPG5O95196 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CSPG5O95196 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.41■□□□□ 0.38
CSPG5O95196 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 ELK1P1-201ENST00000485699 580 ntBASIC17.41■□□□□ 0.38
CSPG5O95196 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.41■□□□□ 0.38
CSPG5O95196 SNX29P1-201ENST00000548357 1007 ntBASIC17.41■□□□□ 0.38
CSPG5O95196 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
CSPG5O95196 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.41■□□□□ 0.38
CSPG5O95196 SRD5A3P1-201ENST00000603021 949 ntBASIC17.41■□□□□ 0.38
CSPG5O95196 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.41■□□□□ 0.38
CSPG5O95196 AL033527.4-201ENST00000641026 673 ntBASIC17.41■□□□□ 0.38
CSPG5O95196 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CSPG5O95196 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
CSPG5O95196 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CSPG5O95196 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.41■□□□□ 0.38
CSPG5O95196 BTBD7P1-201ENST00000447253 1453 ntBASIC17.41■□□□□ 0.38
CSPG5O95196 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 AC079328.2-201ENST00000561241 3354 ntBASIC17.41■□□□□ 0.38
CSPG5O95196 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.41■□□□□ 0.38
CSPG5O95196 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CSPG5O95196 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.41■□□□□ 0.38
CSPG5O95196 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG5O95196 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CSPG5O95196 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CSPG5O95196 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.4■□□□□ 0.38
CSPG5O95196 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CSPG5O95196 AC011676.5-201ENST00000624864 2660 ntBASIC17.4■□□□□ 0.38
CSPG5O95196 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CSPG5O95196 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.4■□□□□ 0.38
CSPG5O95196 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CSPG5O95196 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.4■□□□□ 0.38
CSPG5O95196 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.4■□□□□ 0.38
CSPG5O95196 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CSPG5O95196 LINC02012-201ENST00000608206 1725 ntBASIC17.4■□□□□ 0.38
CSPG5O95196 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.4■□□□□ 0.38
CSPG5O95196 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.4■□□□□ 0.38
CSPG5O95196 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CSPG5O95196 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.4■□□□□ 0.38
CSPG5O95196 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.4■□□□□ 0.38
CSPG5O95196 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG5O95196 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CSPG5O95196 NKILA-202ENST00000614771 2598 ntBASIC17.39■□□□□ 0.38
CSPG5O95196 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms