Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.35■□□□□ 0.21
GPC4O75487 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.35■□□□□ 0.21
GPC4O75487 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.35■□□□□ 0.21
GPC4O75487 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
GPC4O75487 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.35■□□□□ 0.21
GPC4O75487 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
GPC4O75487 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GPC4O75487 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.35■□□□□ 0.21
GPC4O75487 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
GPC4O75487 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.34■□□□□ 0.21
GPC4O75487 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.34■□□□□ 0.21
GPC4O75487 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
GPC4O75487 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.34■□□□□ 0.21
GPC4O75487 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
GPC4O75487 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.34■□□□□ 0.21
GPC4O75487 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.34■□□□□ 0.21
GPC4O75487 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.34■□□□□ 0.21
GPC4O75487 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.34■□□□□ 0.21
GPC4O75487 AL009183.1-201ENST00000603760 355 ntBASIC16.34■□□□□ 0.21
GPC4O75487 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.34■□□□□ 0.21
GPC4O75487 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.34■□□□□ 0.21
GPC4O75487 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.34■□□□□ 0.21
GPC4O75487 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
GPC4O75487 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.34■□□□□ 0.21
GPC4O75487 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
GPC4O75487 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.34■□□□□ 0.21
GPC4O75487 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.34■□□□□ 0.21
GPC4O75487 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
GPC4O75487 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GPC4O75487 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GPC4O75487 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GPC4O75487 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
GPC4O75487 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
GPC4O75487 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.33■□□□□ 0.21
GPC4O75487 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
GPC4O75487 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
GPC4O75487 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
GPC4O75487 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.33■□□□□ 0.21
GPC4O75487 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.33■□□□□ 0.21
GPC4O75487 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.33■□□□□ 0.2
GPC4O75487 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.33■□□□□ 0.2
GPC4O75487 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
GPC4O75487 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.33■□□□□ 0.2
GPC4O75487 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.33■□□□□ 0.2
GPC4O75487 AC021097.1-201ENST00000607902 574 ntBASIC16.33■□□□□ 0.2
GPC4O75487 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.33■□□□□ 0.2
GPC4O75487 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.33■□□□□ 0.2
GPC4O75487 GGT3P-204ENST00000453783 1664 ntBASIC16.33■□□□□ 0.2
GPC4O75487 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
GPC4O75487 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.33■□□□□ 0.2
GPC4O75487 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.33■□□□□ 0.2
GPC4O75487 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC4O75487 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.32■□□□□ 0.2
GPC4O75487 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
GPC4O75487 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.32■□□□□ 0.2
GPC4O75487 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms