Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF2O60811 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEF2O60811 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF2O60811 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF2O60811 AL662844.4-201ENST00000606367 2838 ntBASIC15.27■□□□□ 0.03
PRAMEF2O60811 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF2O60811 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.27■□□□□ 0.03
PRAMEF2O60811 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF2O60811 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF2O60811 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF2O60811 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PRAMEF2O60811 AC092364.2-201ENST00000596710 2692 ntBASIC15.27■□□□□ 0.03
PRAMEF2O60811 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF2O60811 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.27■□□□□ 0.03
PRAMEF2O60811 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF2O60811 REXO1L8P-201ENST00000604378 1897 ntBASIC15.27■□□□□ 0.03
PRAMEF2O60811 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PRAMEF2O60811 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF2O60811 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF2O60811 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 AC006449.6-201ENST00000612330 2296 ntBASIC15.26■□□□□ 0.03
PRAMEF2O60811 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 MIR943-201ENST00000401286 94 ntBASIC15.26■□□□□ 0.03
PRAMEF2O60811 AC055876.3-201ENST00000431496 288 ntBASIC15.26■□□□□ 0.03
PRAMEF2O60811 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 SPDYE14P-201ENST00000442619 822 ntBASIC15.26■□□□□ 0.03
PRAMEF2O60811 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 AP000842.3-202ENST00000569238 1080 ntBASIC15.26■□□□□ 0.03
PRAMEF2O60811 AC073389.1-201ENST00000595595 795 ntBASIC15.26■□□□□ 0.03
PRAMEF2O60811 AL390955.2-201ENST00000603032 514 ntBASIC15.26■□□□□ 0.03
PRAMEF2O60811 AC138649.4-201ENST00000612222 287 ntBASIC15.26■□□□□ 0.03
PRAMEF2O60811 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF2O60811 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF2O60811 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF2O60811 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF2O60811 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF2O60811 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF2O60811 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF2O60811 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF2O60811 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF2O60811 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF2O60811 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF2O60811 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 BASP1P1-201ENST00000430708 665 ntBASIC15.25■□□□□ 0.03
PRAMEF2O60811 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF2O60811 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF2O60811 ALG1L8P-201ENST00000533887 760 ntBASIC15.25■□□□□ 0.03
PRAMEF2O60811 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 AL592424.1-201ENST00000563624 1536 ntBASIC15.25■□□□□ 0.03
PRAMEF2O60811 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF2O60811 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF2O60811 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF2O60811 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF2O60811 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms