Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 AC004461.1-201ENST00000412461 403 ntBASIC16.53■□□□□ 0.24
CAPN8A6NHC0 PRYP6-201ENST00000514804 343 ntBASIC16.53■□□□□ 0.24
CAPN8A6NHC0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.53■□□□□ 0.24
CAPN8A6NHC0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 ALOX12P2-203ENST00000570921 1945 ntBASIC16.53■□□□□ 0.24
CAPN8A6NHC0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.53■□□□□ 0.24
CAPN8A6NHC0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 ME2P1-201ENST00000426028 1970 ntBASIC16.52■□□□□ 0.24
CAPN8A6NHC0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 RNA5SP421-201ENST00000516864 134 ntBASIC16.52■□□□□ 0.24
CAPN8A6NHC0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 AL138918.1-201ENST00000568306 659 ntBASIC16.52■□□□□ 0.24
CAPN8A6NHC0 AC027307.2-201ENST00000591252 911 ntBASIC16.52■□□□□ 0.24
CAPN8A6NHC0 AC073389.1-201ENST00000595595 795 ntBASIC16.52■□□□□ 0.24
CAPN8A6NHC0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CAPN8A6NHC0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.52■□□□□ 0.23
CAPN8A6NHC0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN8A6NHC0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN8A6NHC0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN8A6NHC0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.52■□□□□ 0.23
CAPN8A6NHC0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN8A6NHC0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CAPN8A6NHC0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 DBET-201ENST00000630918 3363 ntBASIC16.51■□□□□ 0.23
CAPN8A6NHC0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 AL592309.1-201ENST00000443127 649 ntBASIC16.51■□□□□ 0.23
CAPN8A6NHC0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 AC069335.1-201ENST00000489972 472 ntBASIC16.51■□□□□ 0.23
CAPN8A6NHC0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 AC105233.2-201ENST00000523697 349 ntBASIC16.51■□□□□ 0.23
CAPN8A6NHC0 AF228730.5-201ENST00000530288 346 ntBASIC16.51■□□□□ 0.23
CAPN8A6NHC0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 KRT8P23-201ENST00000560090 1207 ntBASIC16.51■□□□□ 0.23
CAPN8A6NHC0 LINC01225-203ENST00000563550 1244 ntBASIC16.51■□□□□ 0.23
CAPN8A6NHC0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 MIR4745-201ENST00000577608 62 ntBASIC16.51■□□□□ 0.23
CAPN8A6NHC0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 AC004835.2-201ENST00000603762 682 ntBASIC16.51■□□□□ 0.23
CAPN8A6NHC0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN8A6NHC0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms