Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 TSEN15P1-201ENST00000423257 515 ntBASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 RBPMS2P1-201ENST00000437762 623 ntBASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 ALG1L8P-201ENST00000533887 760 ntBASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 AC004449.1-201ENST00000564240 433 ntBASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 AC026979.3-201ENST00000607315 403 ntBASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 AL592424.1-201ENST00000563624 1536 ntBASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SMIM9A6NGZ8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 AL353705.2-201ENST00000428243 662 ntBASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 AC067863.1-201ENST00000494933 530 ntBASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 RNA5SP410-201ENST00000516285 106 ntBASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 RARRES2P9-201ENST00000565168 469 ntBASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
SMIM9A6NGZ8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms