Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
TRBV6-7A0A0A0MS04 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 FAM185BP-201ENST00000443595 716 ntBASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 AC105339.3-201ENST00000560043 636 ntBASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 MIR3909-201ENST00000579518 119 ntBASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 AL359258.3-201ENST00000622910 2331 ntBASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-7A0A0A0MS04 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 RNU1-129P-201ENST00000384064 167 ntBASIC13.6□□□□□ -0.23
TRBV6-7A0A0A0MS04 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms