Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 YBX1P4-201ENST00000392794 808 ntBASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 POU5F1P6-201ENST00000466990 990 ntBASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 AC103834.1-201ENST00000520383 144 ntBASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 AC009065.1-201ENST00000564055 1225 ntBASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 AC233992.3-201ENST00000607491 485 ntBASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 AC016405.3-201ENST00000607710 860 ntBASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 AL121906.2-201ENST00000621597 723 ntBASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 AL139011.1-202ENST00000642063 584 ntBASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 AC105250.1-201ENST00000509378 2057 ntBASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 MIR193BHG-211ENST00000641433 5365 ntBASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 OS9-218ENST00000551035 2246 ntTSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LINC01558Q9Y6Z2 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
LINC01558Q9Y6Z2 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
LINC01558Q9Y6Z2 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
LINC01558Q9Y6Z2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
LINC01558Q9Y6Z2 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.08
LINC01558Q9Y6Z2 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 MAPT-IT1-201ENST00000624111 3016 ntBASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LINC01558Q9Y6Z2 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms