Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.44■□□□□ 0.06
CLCA3PQ9Y6N3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLCA3PQ9Y6N3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.44■□□□□ 0.06
CLCA3PQ9Y6N3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCA3PQ9Y6N3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
CLCA3PQ9Y6N3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCA3PQ9Y6N3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLCA3PQ9Y6N3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCA3PQ9Y6N3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 AC007950.2-201ENST00000615045 2347 ntBASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 AC004461.1-201ENST00000412461 403 ntBASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 AC008267.7-201ENST00000624570 1194 ntBASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 PCGF3-213ENST00000620529 1899 ntBASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCA3PQ9Y6N3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 KRT8P23-201ENST00000560090 1207 ntBASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 AP001160.2-201ENST00000596071 487 ntBASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 UXT-AS1-201ENST00000590504 1525 ntBASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCA3PQ9Y6N3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCA3PQ9Y6N3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA3PQ9Y6N3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA3PQ9Y6N3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA3PQ9Y6N3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCA3PQ9Y6N3 GGT3P-204ENST00000453783 1664 ntBASIC15.41■□□□□ 0.06
CLCA3PQ9Y6N3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA3PQ9Y6N3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLCA3PQ9Y6N3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA3PQ9Y6N3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CLCA3PQ9Y6N3 PAUPAR-201ENST00000630360 2965 ntBASIC15.41■□□□□ 0.06
CLCA3PQ9Y6N3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCA3PQ9Y6N3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms