Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CYP46A1Q9Y6A2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CYP46A1Q9Y6A2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP46A1Q9Y6A2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CYP46A1Q9Y6A2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP46A1Q9Y6A2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP46A1Q9Y6A2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP46A1Q9Y6A2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP46A1Q9Y6A2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 RARRES2P8-201ENST00000566335 367 ntBASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP46A1Q9Y6A2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 AL138918.1-201ENST00000568306 659 ntBASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 MIR4321-201ENST00000592276 80 ntBASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CYP46A1Q9Y6A2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CYP46A1Q9Y6A2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CYP46A1Q9Y6A2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CYP46A1Q9Y6A2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CYP46A1Q9Y6A2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CYP46A1Q9Y6A2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CYP46A1Q9Y6A2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms