Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.84■□□□□ 0.93
SMC4Q9NTJ3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.84■□□□□ 0.93
SMC4Q9NTJ3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.84■□□□□ 0.93
SMC4Q9NTJ3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMC4Q9NTJ3 CDC14C-201ENST00000428251 1719 ntBASIC20.84■□□□□ 0.93
SMC4Q9NTJ3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SMC4Q9NTJ3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SMC4Q9NTJ3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SMC4Q9NTJ3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SMC4Q9NTJ3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMC4Q9NTJ3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 LINC02447-202ENST00000501888 2146 ntBASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 HLA-H-201ENST00000383620 1096 ntBASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 AL596442.2-201ENST00000610240 980 ntBASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.83■□□□□ 0.93
SMC4Q9NTJ3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.83■□□□□ 0.92
SMC4Q9NTJ3 AC069224.1-201ENST00000566372 1715 ntBASIC20.83■□□□□ 0.92
SMC4Q9NTJ3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMC4Q9NTJ3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC20.83■□□□□ 0.92
SMC4Q9NTJ3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMC4Q9NTJ3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SMC4Q9NTJ3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.83■□□□□ 0.92
SMC4Q9NTJ3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.83■□□□□ 0.92
SMC4Q9NTJ3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SMC4Q9NTJ3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SMC4Q9NTJ3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
SMC4Q9NTJ3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 AP3S2-216ENST00000617003 1561 ntBASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 AC245100.5-201ENST00000452108 331 ntBASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 AL365203.3-201ENST00000609742 2057 ntBASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMC4Q9NTJ3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMC4Q9NTJ3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMC4Q9NTJ3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMC4Q9NTJ3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMC4Q9NTJ3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.81■□□□□ 0.92
SMC4Q9NTJ3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.81■□□□□ 0.92
SMC4Q9NTJ3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.81■□□□□ 0.92
SMC4Q9NTJ3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMC4Q9NTJ3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC20.81■□□□□ 0.92
SMC4Q9NTJ3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SMC4Q9NTJ3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMC4Q9NTJ3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SMC4Q9NTJ3 HAUS4P1-201ENST00000406739 1145 ntBASIC20.81■□□□□ 0.92
SMC4Q9NTJ3 AC254562.1-201ENST00000417586 456 ntBASIC20.81■□□□□ 0.92
SMC4Q9NTJ3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms