Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CBX8Q9HC52 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CBX8Q9HC52 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CBX8Q9HC52 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CBX8Q9HC52 AC105250.1-201ENST00000509378 2057 ntBASIC18.18■□□□□ 0.5
CBX8Q9HC52 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CBX8Q9HC52 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CBX8Q9HC52 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX8Q9HC52 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX8Q9HC52 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 HAUS4P1-201ENST00000406739 1145 ntBASIC18.18■□□□□ 0.5
CBX8Q9HC52 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 FGFR3P6-201ENST00000457012 610 ntBASIC18.18■□□□□ 0.5
CBX8Q9HC52 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 AC091951.1-201ENST00000512854 2465 ntBASIC18.18■□□□□ 0.5
CBX8Q9HC52 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX8Q9HC52 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CBX8Q9HC52 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CBX8Q9HC52 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.17■□□□□ 0.5
CBX8Q9HC52 AC023908.3-201ENST00000564211 3047 ntBASIC18.17■□□□□ 0.5
CBX8Q9HC52 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 SNX18-202ENST00000343017 3140 ntBASIC18.17■□□□□ 0.5
CBX8Q9HC52 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 MIR1224-201ENST00000408193 85 ntBASIC18.17■□□□□ 0.5
CBX8Q9HC52 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.17■□□□□ 0.5
CBX8Q9HC52 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CBX8Q9HC52 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 ATP5G2P1-201ENST00000433580 426 ntBASIC18.16■□□□□ 0.5
CBX8Q9HC52 RPS15P9-201ENST00000494093 319 ntBASIC18.16■□□□□ 0.5
CBX8Q9HC52 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 AC025062.2-201ENST00000605477 670 ntBASIC18.16■□□□□ 0.5
CBX8Q9HC52 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms