Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SPTSSB-204ENST00000617024 1292 ntBASIC15.54■□□□□ 0.08
BRF2Q9HAW0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.53■□□□□ 0.08
BRF2Q9HAW0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 MCCD1P2-201ENST00000423228 335 ntBASIC15.53■□□□□ 0.08
BRF2Q9HAW0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 KRT18P58-201ENST00000527480 1120 ntBASIC15.53■□□□□ 0.08
BRF2Q9HAW0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 AL138918.1-201ENST00000568306 659 ntBASIC15.53■□□□□ 0.08
BRF2Q9HAW0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 CICP6-201ENST00000457191 2729 ntBASIC15.53■□□□□ 0.08
BRF2Q9HAW0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BRF2Q9HAW0 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.53■□□□□ 0.08
BRF2Q9HAW0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 AC023274.1-201ENST00000418278 595 ntBASIC15.52■□□□□ 0.08
BRF2Q9HAW0 ADH5P3-201ENST00000433842 1137 ntBASIC15.52■□□□□ 0.08
BRF2Q9HAW0 FAM58CP-201ENST00000435741 640 ntBASIC15.52■□□□□ 0.08
BRF2Q9HAW0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 AC092902.6-201ENST00000641783 218 ntBASIC15.52■□□□□ 0.08
BRF2Q9HAW0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
BRF2Q9HAW0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 PKD1P5-201ENST00000532415 10291 ntBASIC15.52■□□□□ 0.07
BRF2Q9HAW0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
BRF2Q9HAW0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 PAUPAR-201ENST00000630360 2965 ntBASIC15.51■□□□□ 0.07
BRF2Q9HAW0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms