Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 TSPY14P-201ENST00000303979 915 ntBASIC13.22□□□□□ -0.29
NKX6-2Q9C056 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 FITM1-202ENST00000559294 800 ntBASIC13.22□□□□□ -0.29
NKX6-2Q9C056 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 AL157888.1-201ENST00000631930 593 ntBASIC13.22□□□□□ -0.29
NKX6-2Q9C056 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 KRT18P48-201ENST00000434763 852 ntBASIC13.21□□□□□ -0.29
NKX6-2Q9C056 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 EGLN1P1-201ENST00000531623 762 ntBASIC13.21□□□□□ -0.29
NKX6-2Q9C056 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 AL049637.2-201ENST00000641778 930 ntBASIC13.21□□□□□ -0.29
NKX6-2Q9C056 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 LINC01230-201ENST00000625222 3017 ntBASIC13.21□□□□□ -0.29
NKX6-2Q9C056 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX6-2Q9C056 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 AL023775.1-201ENST00000454907 1746 ntBASIC13.21□□□□□ -0.3
NKX6-2Q9C056 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
NKX6-2Q9C056 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
NKX6-2Q9C056 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms