Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 LINC01144-201ENST00000626198 1710 ntBASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 AL353705.2-201ENST00000428243 662 ntBASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 MIR4453-201ENST00000584019 89 ntBASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 FOXO1B-201ENST00000504678 1527 ntBASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP3Q9BWW4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.58□□□□□ -0.23
SSBP3Q9BWW4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SSBP3Q9BWW4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SSBP3Q9BWW4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SSBP3Q9BWW4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SSBP3Q9BWW4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SSBP3Q9BWW4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 AL391005.1-201ENST00000623953 2435 ntBASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 MIR943-201ENST00000401286 94 ntBASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 AC069120.2-201ENST00000524091 540 ntBASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 DUX4L27-201ENST00000554796 1261 ntBASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 GGT3P-204ENST00000453783 1664 ntBASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSBP3Q9BWW4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms