Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB3IPQ96QF0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.93■□□□□ 0.14
RAB3IPQ96QF0 C8orf49-201ENST00000525043 1968 ntBASIC15.93■□□□□ 0.14
RAB3IPQ96QF0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB3IPQ96QF0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
RAB3IPQ96QF0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB3IPQ96QF0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 ST20-AS1-201ENST00000560255 4223 ntBASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 AC007686.3-201ENST00000619017 3487 ntBASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 AL355075.4-201ENST00000554988 638 ntBASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.92■□□□□ 0.14
RAB3IPQ96QF0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 AC005840.4-201ENST00000541242 2494 ntBASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 GPAA1P2-202ENST00000606848 1787 ntBASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 AL596275.1-201ENST00000423464 877 ntBASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 C2orf69P3-201ENST00000565542 1120 ntBASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 AC010654.1-201ENST00000615722 808 ntBASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms