Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 RNU1-129P-201ENST00000384064 167 ntBASIC14.74□□□□□ -0.05
LRRC46Q96FV0 AL035633.1-201ENST00000406139 838 ntBASIC14.74□□□□□ -0.05
LRRC46Q96FV0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 TERF1P3-201ENST00000505638 1227 ntBASIC14.74□□□□□ -0.05
LRRC46Q96FV0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 AC069120.2-201ENST00000524091 540 ntBASIC14.74□□□□□ -0.05
LRRC46Q96FV0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 DUX4L27-201ENST00000554796 1261 ntBASIC14.74□□□□□ -0.05
LRRC46Q96FV0 AC051619.7-201ENST00000568314 623 ntBASIC14.74□□□□□ -0.05
LRRC46Q96FV0 U1.21-201ENST00000580816 167 ntBASIC14.74□□□□□ -0.05
LRRC46Q96FV0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 AC063926.3-201ENST00000624734 5658 ntBASIC14.74□□□□□ -0.05
LRRC46Q96FV0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRC46Q96FV0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 AC138761.1-201ENST00000584393 385 ntBASIC14.73□□□□□ -0.05
LRRC46Q96FV0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC46Q96FV0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.72□□□□□ -0.05
LRRC46Q96FV0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms