Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 AC007967.3-201ENST00000434308 558 ntBASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 AL023775.1-201ENST00000454907 1746 ntBASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 AP000525.1-201ENST00000608286 694 ntBASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 AC148477.4-201ENST00000613430 1793 ntBASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 CICP8-201ENST00000455800 2813 ntBASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 AC009336.1-201ENST00000608941 1553 ntBASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 FAM8A6P-201ENST00000407496 1135 ntBASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 AC092666.2-201ENST00000613287 246 ntBASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms