Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NUDCD3Q8IVD9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.21■□□□□ 0.18
NUDCD3Q8IVD9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
NUDCD3Q8IVD9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NUDCD3Q8IVD9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
NUDCD3Q8IVD9 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NUDCD3Q8IVD9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 AC020658.6-201ENST00000623564 1870 ntBASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 ARMC10P1-201ENST00000313754 855 ntBASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 AL049597.2-201ENST00000565575 961 ntBASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 MTDHP4-201ENST00000600287 670 ntBASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 AL805961.1-202ENST00000641562 540 ntBASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 U82695.1-201ENST00000635752 1889 ntBASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
NUDCD3Q8IVD9 AC129492.6-201ENST00000611383 1305 ntBASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms