Protein–RNA interactions for Protein: Q7LGC8

CHST3, Carbohydrate sulfotransferase 3, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3Q7LGC8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 AC084121.4-201ENST00000641598 221 ntBASIC19.2■□□□□ 0.66
CHST3Q7LGC8 AF228730.8-201ENST00000642140 221 ntBASIC19.2■□□□□ 0.66
CHST3Q7LGC8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CHST3Q7LGC8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 AL603832.2-201ENST00000566195 2125 ntBASIC19.19■□□□□ 0.66
CHST3Q7LGC8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 HYMAI-201ENST00000635591 3347 ntBASIC19.19■□□□□ 0.66
CHST3Q7LGC8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 RBPMS2P1-201ENST00000437762 623 ntBASIC19.19■□□□□ 0.66
CHST3Q7LGC8 CYMP-203ENST00000474680 1263 ntBASIC19.19■□□□□ 0.66
CHST3Q7LGC8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 RNA5SP410-201ENST00000516285 106 ntBASIC19.19■□□□□ 0.66
CHST3Q7LGC8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 AC093028.1-201ENST00000622998 982 ntBASIC19.19■□□□□ 0.66
CHST3Q7LGC8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHST3Q7LGC8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 TSEN15P1-201ENST00000423257 515 ntBASIC19.18■□□□□ 0.66
CHST3Q7LGC8 AL645939.2-201ENST00000427340 991 ntBASIC19.18■□□□□ 0.66
CHST3Q7LGC8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.18■□□□□ 0.66
CHST3Q7LGC8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHST3Q7LGC8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms