Protein–RNA interactions for Protein: Q71SY5

MED25, Mediator of RNA polymerase II transcription subunit 25, humanhuman

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED25Q71SY5 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MED25Q71SY5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.32■□□□□ 0.04
MED25Q71SY5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MED25Q71SY5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MED25Q71SY5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MED25Q71SY5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MED25Q71SY5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.32■□□□□ 0.04
MED25Q71SY5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MED25Q71SY5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
MED25Q71SY5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MED25Q71SY5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.32■□□□□ 0.04
MED25Q71SY5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MED25Q71SY5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MED25Q71SY5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MED25Q71SY5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MED25Q71SY5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.31■□□□□ 0.04
MED25Q71SY5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.31■□□□□ 0.04
MED25Q71SY5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.31■□□□□ 0.04
MED25Q71SY5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 AC005052.1-201ENST00000625181 2492 ntBASIC15.31■□□□□ 0.04
MED25Q71SY5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 MRPS18AP1-201ENST00000414458 589 ntBASIC15.31■□□□□ 0.04
MED25Q71SY5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 SERBP1P5-201ENST00000510079 1181 ntBASIC15.31■□□□□ 0.04
MED25Q71SY5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.31■□□□□ 0.04
MED25Q71SY5 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
MED25Q71SY5 AC004233.3-201ENST00000607794 1269 ntBASIC15.31■□□□□ 0.04
MED25Q71SY5 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MED25Q71SY5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MED25Q71SY5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.31■□□□□ 0.04
MED25Q71SY5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.31■□□□□ 0.04
MED25Q71SY5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 CETN4P-206ENST00000642099 2168 ntBASIC15.31■□□□□ 0.04
MED25Q71SY5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MED25Q71SY5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MED25Q71SY5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.3■□□□□ 0.04
MED25Q71SY5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MED25Q71SY5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MED25Q71SY5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MED25Q71SY5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
MED25Q71SY5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MED25Q71SY5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MED25Q71SY5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.3■□□□□ 0.04
MED25Q71SY5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MED25Q71SY5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
MED25Q71SY5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.3■□□□□ 0.04
MED25Q71SY5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.3■□□□□ 0.04
MED25Q71SY5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.3■□□□□ 0.04
MED25Q71SY5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.3■□□□□ 0.04
MED25Q71SY5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
MED25Q71SY5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.3■□□□□ 0.04
MED25Q71SY5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.3■□□□□ 0.04
MED25Q71SY5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.3■□□□□ 0.04
MED25Q71SY5 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.3■□□□□ 0.04
MED25Q71SY5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.3■□□□□ 0.04
MED25Q71SY5 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
MED25Q71SY5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
MED25Q71SY5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MED25Q71SY5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.3■□□□□ 0.04
MED25Q71SY5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MED25Q71SY5 MTHFR-217ENST00000641820 1569 ntBASIC15.3■□□□□ 0.04
MED25Q71SY5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.3■□□□□ 0.04
MED25Q71SY5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MED25Q71SY5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MED25Q71SY5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MED25Q71SY5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms