Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 AC069262.1-201ENST00000539058 672 ntBASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 MIR6080-201ENST00000617359 66 ntBASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC41PQ6P2S7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 AC006538.3-201ENST00000612495 578 ntBASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 AL035456.1-201ENST00000456064 1369 ntBASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TTC41PQ6P2S7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 AC007950.2-201ENST00000615045 2347 ntBASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 AL133215.2-201ENST00000609242 977 ntBASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 AC003101.2-201ENST00000612557 442 ntBASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TTC41PQ6P2S7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TTC41PQ6P2S7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.64■□□□□ 0.74
TTC41PQ6P2S7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TTC41PQ6P2S7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TTC41PQ6P2S7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TTC41PQ6P2S7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TTC41PQ6P2S7 AP005117.1-202ENST00000581724 1908 ntBASIC19.64■□□□□ 0.74
TTC41PQ6P2S7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 MIR4453-201ENST00000584019 89 ntBASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 AC015911.4-201ENST00000588022 1070 ntBASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TTC41PQ6P2S7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms